Boutique hotels in La Crosse

4.96 out of 5 average rating, 24 reviews

The historic Burlington Hotel features a striking red brick facade with white accents, showcasing a classic balcony on the second level. The entrance is framed by windows, while colorful flowers line the base, contributing to a welcoming atmosphere. Trees and greenery are visible in the background.

Hotel room in Alma

ALL 5 BEDROOMS !! - Burlington Hotel & Bar

The Burlington Hotel & Bar was built with 12 sleeping rooms for railroad workers in 1891. Located in Alma along the Mississippi River and still along active railroad tracks, it was added to the National Register of Historical Places in 1982. The hotel now features 5 bedrooms for up to 12 guests, a bar & a shop called 'Queen Bee Alma' offering crochet & craft classes. Location: 1/2 mile from the marina/beach, a few doors down from Kwik Trip, and a short walk to the bars & shops, downtown Alma.

The room features a queen bed with a textured headboard against a light wall. A window offers views of the surrounding greenery, and a television is mounted on the opposite wall. Additional details include a bedside lamp and a small shelving unit.

5 out of 5 average rating, 5 reviews

Root River Inn, Whalan En Suite

This room, named after the smallest town on the Root River Trail, is our smallest room. Perfect if you just plan to sleep here an be out enjoying the day. There is a bench and a stool in the room. This room has a window overlooking main street. You can see the bike trail and the bridge from your room. Recline in your queen bed and watch the Roku TV where you can watch many free channels or log into your own services. This room has the sink in the room and toilet and shower in the bathroom.

4.94 out of 5 average rating, 18 reviews

A bright corner showcases a modern white chair set against textured black walls. A vibrant artwork featuring a blue face decorates the door, while another colorful painting adds visual interest nearby. Natural light enters through a tall window, illuminating the polished concrete floor.

Hotel room in Sparta

b3 Room1: Awareness King Suite

Where creativity meets comfort, where art inspires at every corner, and every detail is designed to bring you joy. Welcome to b3experience, a one-of-a-kind art-inspired micro-hotel in the heart of Sparta, Wisconsin. Whether you seek adventure or tranquility, b3experience offers unforgettable memories. Rent a single suite for a business trip or romantic weekend, or bring your friends and rent multiple of our 4 private suites, each with their own private full bathroom, for a unique getaway!

4.71 out of 5 average rating, 7 reviews

A cozy bedroom is highlighted by a king-sized bed dressed in dark bedding, complemented by bright green pillows. Soft, glowing blue lighting enhances the modern decor, while a sleek fireplace feature adds a touch of warmth to the ambiance.

Hotel room in Sparta

b3 Room2: Brain King Suite

4.96 out of 5 average rating, 28 reviews

The room features a cozy seating area with a plush couch, complemented by a spacious bed adorned with floral bedding. A Jacuzzi tub is positioned nearby, offering convenience for relaxation. Natural light enters through the window, illuminating the wooden floors and charming decor.

Hotel room in Alma

The Tritsch House Walser Room

Enjoy a private room in this fully remodeled 1902 Queen Anne. The Walser Room has a private bathroom with shower, as well as a Jacuzzi tub. Guests have access to all of the main level common areas including the parlor, living and dining rooms, and any one of the three porches. Two of these porches have Mississippi River views. Guests also love hanging out in the newly remodeled kitchen. Sorry, but microwave only cooking. This is not a bed and breakfast and breakfast is not provided.

A cozy bedroom is presented with a vintage wooden bed framed by delicate floral wallpaper. A light-drenched window, adorned with flowing blue curtains, complements the space. A floor lamp stands to one side, while a plush chair is positioned near the wall.

4.6 out of 5 average rating, 5 reviews

AH #24 Full w/Shower

We think you will find our historic hotel charming with authentic period furniture and cozy rooms with modern amenities. Modern amenities include as central air and heating, WIFI, flat screen TVs and private bathrooms. Be sure to make a reservation with the front desk to relax in our new Sauna Room located on the 2nd floor. We’re located near local businesses including a quaint coffee shop just behind the hotel, multiple restaurants and shops all located near the Mississippi River.

The welcoming lobby features a large stone fireplace surrounded by comfortable seating, including a full-size sofa and armchairs. A decorative coffee table sits centrally, adorned with floral arrangements and vases. Natural light flows from nearby windows, contributing to a warm ambiance.

Hotel room in La Crosse

4.56 out of 5 average rating, 130 reviews

Suite in Hotel

The GrandStay Hotel & Suites La Crosse is located in beautiful downtown, steps from the Mississippi River and International Friendship Gardens. Our One Bedroom Suite offers a queen size bed in a separate bedroom, full kitchen with place settings for four and table with two chairs . In the living area of the suite guests can relax on a full size sofa sleeper and club chair with ottoman. We offer complimentary Grand Start Breakfast, free internet and free parking.

A bright, airy room features two spacious beds with white bedding and wooden headboards. A small table and chair are placed near the doors, which lead to a balcony overlooking the lush landscaping. Natural light fills the space through large windows.

Root River Inn, Houston En Suite

You'll be close to the outdoors in this balcony facing room. Sit outside your room and enjoy the view of the landscaping. Your table is there when you want to make your day plans, get a bit of work done or play a game, but folds up if you need some extra space. Get some rest in your queen or full bed after a great day or recline and watch the Roku TV where you have access to many free channels or log into your own services. All our rooms have a full bath.

The room features a spacious bed with a wooden headboard, complemented by bedside lighting. A window provides natural light and views of greenery outside. A small side table and a foldable storage unit are visible, enhancing the room's functionality.

Root River Inn, Fountain En Suite

his bright and airy room has windows overlooking the terraced garden and main street. You can see the bike trail, the bridge and the river from your room. Plan your next adventure at your sitting area. Recline in your queen bed and watch the Roku TV where you can watch many free channels or log into your own services. The couch folds down for an extra bed if needed. All our rooms have a full private bath.

4.92 out of 5 average rating, 25 reviews

The room features a wooden bed with a decorative headboard and an intricately patterned green bedspread. A cozy seating area is present beside the bed. A door leads to a private bathroom equipped with a bathtub, while light enters through a nearby window.

Hotel room in Alma

Belle of Alma-1BR/1BA w/Jacuzzi @The Tritsch House

Enjoy a private room in this fully remodeled 1902 Queen Anne. Guests have access to all of the main level common areas including the parlor, living and dining rooms, and any one of the three porches. Two of these porches have Mississippi River views. Guests also love hanging out in the newly remodeled kitchen. Sorry, but microwave only cooking.

A cozy common area features rustic wooden beams and a stone fireplace. Leather sofas and wooden chairs surround a circular coffee table, while soft lighting creates a relaxed ambiance. A large area rug adds warmth to the space, enhancing the lodge-style atmosphere.

4.5 out of 5 average rating, 4 reviews

Stoney Creek, Deluxe 2 Queen, Cozy Rooms | 3 Units

Explore Vibrant La Crosse: Downtown shopping, dining & cultural scene. Scenic bluffs, hiking, biking & paddling in the Mighty Mississippi River! Immerse in local art, music & theater scenes. Conveniently located near attractions. Discover the adventure of La Crosse, WI!

A cozy sleeping area features a wooden bed adorned with a multi-patterned quilt. Stone walls provide a unique texture, while soft lighting is offered by wall sconces. A compact kitchenette is visible in the background, with wooden cabinetry and modern finishes.

4.89 out of 5 average rating, 19 reviews

Stone Mill Hotel & Suites - Forest Whirlpool Suite

The Lanesboro area has many natural forest settings. Beautiful hardwoods and stately pines are testimony to area goals of sustainability and ecological land management. The Forest Suite provides a nature scene with a bubbling double whirlpool bath.

Popular amenities for La Crosse boutique hotels

Kitchen

Wifi

Pool

Free parking on premises

Air conditioning

Family-friendly boutique hotels

A theme suite features a king bed with a rustic log frame, accompanied by two bedside tables with lamps. A cozy seating area is present, and a whirlpool tub is visible in the foreground, enhancing the inviting ambiance of the space.

Theme Suite Mini Premier, Stoney Creek, 2 Pools!

A bathroom features a combination of a jetted bathtub and a separate toilet. A wooden vanity with a sink is present, accompanied by a mirror and towel rack. Light blue tile flooring contributes to the room's clean and functional design.

4 out of 5 average rating, 5 reviews

AH #2 Queen Suite w/Jacuzzi

A bathroom features a standing shower with a clear glass door and textured panels. A white sink with exposed plumbing is located beside a stylish mirror. Light enters through a window, illuminating the unique vintage wallpaper.

4.21 out of 5 average rating, 14 reviews

AH #10 Full w/Shower

A living area is featured with rustic decor, including a comfortable sofa and two wooden coffee tables. A stone fireplace is prominently displayed, accompanied by a flat-screen TV mounted on the wall. Natural light enters through large windows, with scenic views of the surrounding landscape.

Theme Suite Whirlpool w/ Living Room! Stoney Creek

A rustic kitchen area features rich wooden cabinetry and a spacious counter. Modern appliances, including a refrigerator and microwave, are integrated seamlessly. Two bar stools with decorative cushions provide seating at the elongated table, offering a welcoming space for dining or casual gatherings.

Cabin Feel: Comfy Beds & Homey Amenities! Parking

An indoor pool area is enclosed by tall wood-beamed ceilings and decorated with muraled trees. The pool features varying depths, and children can be seen playing in the water, while adults relax at the edge. Comfortable seating is provided nearby.

Rustic Charm by the River! Clean & Cozy | 4 Units

A welcoming lobby area is designed with rustic charm, featuring a stone accent wall and comfortable seating. Two armchairs and a sofa are positioned around a wooden coffee table, illuminated by lamps on either side. Textured carpet enhances the cozy atmosphere.

Guest-Praised: Spacious Cozy Rooms, Pool | 3 Units

The room features a king bed with rustic wooden furniture, including a bench and bedside tables with lamps. A stylish armchair is positioned near a window adorned with blinds. Wall art depicting horses adds a thematic touch to the serene ambiance.

Cozy Onalaska Lodge: Hot Tub & Scenic Views! Pool

Boutique hotels with a patio

Root River Inn, Houston En Suite

5 out of 5 average rating, 5 reviews

Root River Inn, Whalan En Suite

A wooden dresser with a matching mirror is positioned against a floral wallpapered wall. A flat-screen TV is atop the dresser, and a doorway can be seen in the background, leading to a bathroom area. Soft carpeting covers the floor.

4.39 out of 5 average rating, 18 reviews

Anderson House #12 -Full bed w/private bath.

A bright and airy living area features a comfortable blue sofa with decorative yellow cushions. Two light green chairs complement a stylish yellow ottoman, while a wall-mounted television and two framed pictures add visual interest. Natural light floods in through the patio doors, leading to a view of trees.

Lanesboro Suite @ Root River Inn Downtown Resort

A bright living area features a light-colored futon sofa with blue-patterned throw pillows. Nearby, two contemporary chairs are positioned around a small wooden table. Large glass doors lead to a private deck, allowing natural light to fill the space.

Root River Inn, Rushford Suite

A spacious living area features large windows allowing natural light to fill the room. A seating area is highlighted by a comfortable blue sofa and a cozy armchair. A desk with a chair is positioned by the window, and a dining table is visible in the foreground.

5 out of 5 average rating, 3 reviews

Root River Inn Downtown Resort Chosen Valley Suite

The guest room features a queen bed with a textured white coverlet, accompanied by two chairs near a window. A small desk with a mini-fridge is visible, and a Roku TV is mounted on the wall. Framed images adorn one wall.

Root River Inn, Peterson En Suite

The room features two spacious beds, each dressed in white bedding with a textured quilt. Warm wooden headboards add an appealing contrast, while a soft rug covers the floor. Natural light enters through a window, highlighting the angles of the high ceiling and simple decor.

Root River Inn, Harmony En Suite

Other boutique hotel holiday rentals

The bathroom boasts a spacious whirlpool tub surrounded by natural wood accents, accompanied by plush towels neatly folded beside it. A rustic bear wall hanging adds a charming touch. A large mirror sits above a long countertop, with a door leading to a private restroom.

Comfy Suites: 2 Pools & Nature Adventure | 2 Units

A rustic-themed hotel room features a king bed with a beautiful wooden frame and matching bedside tables. Natural light filters through the window blinds, casting a warm glow. A relaxing whirlpool tub is situated to one side, enhancing the cozy atmosphere.

Rustic Comfort: Free Hot Breakfast, Pool | 2 Units

A cozy bedroom features a vintage wooden bed with a patterned quilt draped over the foot. Soft green striped wallpaper and a decorative painting are visible above the bed. A bedside table with a lamp and a window adorned with sheer curtains allow natural light to illuminate the room.

4.31 out of 5 average rating, 26 reviews

Anderson House #35 Full w/Tub/Shower

An indoor pool area features a warm, inviting atmosphere, surrounded by pine tree murals. Ladders lead into the water, which has a shallow area marked at 3 feet. Families enjoy the aquatic space, engaging in playful activities while sunlight filters through large windows.

Whirlpool Cozy Theme Suite, Stoney Creek | 4 Units

The bathroom features a vintage clawfoot tub alongside a white shower curtain. A toilet is positioned near the wall. Floral wallpaper adorns the walls, complemented by patterned tiles on the floor. Natural light may enter through an unseen window.

AH #8 Queen Suite w/Tub/Shower

A compact bathroom is presented with a standing shower enclosed by a curtain. A toilet is positioned beside the shower, while towels are neatly hung on a nearby rack. Neutral-colored walls and flooring create a clean and simple appearance.

Anderson House #3 Queen Suite/SS/Shower/Fridge

A spacious lobby area features a stone accent wall and rustic decor. Comfortable seating arrangements include a dark sofa with decorative pillows and leather chairs around a wooden coffee table. Soft lighting is provided by lamps on either side of the sofa.

Stoney Creek Onalaska, Theme Suite, Tub! | 3 Units

A welcoming lobby area features a stone accent wall and rustic décor. Comfortable seating includes a dark leather sofa and armchairs arranged around a wooden coffee table. Warm lighting is provided by table lamps on either side of the sofa, adding to the cozy vibe.